STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV24815.1Hypothetical protein. (82 aa)    
Predicted Functional Partners:
SFV24813.1
Protein of unknown function.
  
    0.508
SFV24811.1
Helix-turn-helix domain-containing protein.
       0.493
SFV20090.1
Two component transcriptional regulator, LuxR family.
   
 0.492
SFV20285.1
Two-component system, NarL family, response regulator DesR.
   
 0.492
SFV23166.1
Regulatory protein, luxR family.
   
 0.492
SFV23377.1
Two component transcriptional regulator, LuxR family.
   
 0.492
SFV23796.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
   
 0.492
SFV24034.1
Two component transcriptional regulator, LuxR family.
   
 0.492
SFV24063.1
Two component transcriptional regulator, LuxR family.
   
 0.492
SFV24069.1
Two component transcriptional regulator, LuxR family.
   
 0.492
Your Current Organism:
Micrococcus terreus
NCBI taxonomy Id: 574650
Other names: CGMCC 1.7054, JCM 17489, M. terreus, Micrococcus sp. V3M1, Micrococcus terreus Zhang et al. 2010, NBRC 104258, strain V3M1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.