STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pleDResponse regulator PleD; Involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; Derived by automated computational analysis using gene prediction method: Protein Homology. (457 aa)    
Predicted Functional Partners:
KYG25079.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
KYG21420.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
0.999
KYG20861.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.997
KYG20546.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
KYG21021.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
KYG19212.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
KYG21921.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
KYG20949.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.992
KYG19612.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.987
KYG20151.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.987
Your Current Organism:
Bradyrhizobium sp. AT1
NCBI taxonomy Id: 574934
Other names: B. sp. AT1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.