STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYG22420.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)    
Predicted Functional Partners:
KYG22421.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.723
KYG22419.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.638
KYG21200.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.601
KYG18846.1
Antirepressor regulating drug resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.550
KYG21030.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.498
KYG23138.1
Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.498
KYG23368.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.458
KYG24313.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.458
KYG24411.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.458
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
    0.451
Your Current Organism:
Bradyrhizobium sp. AT1
NCBI taxonomy Id: 574934
Other names: B. sp. AT1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.