STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377665_00909Unannotated protein. (495 aa)    
Predicted Functional Partners:
GCA_000377665_00908
Unannotated protein.
 
 
   0.885
GCA_000377665_01450
Unannotated protein.
  
  
  0.775
GCA_000377665_02938
Unannotated protein.
  
  
  0.770
GCA_000377665_01451
Unannotated protein.
  
  
  0.767
GCA_000377665_01606
Unannotated protein.
  
  
 
0.740
GCA_000377665_01427
Unannotated protein.
    
  0.731
GCA_000377665_02521
Unannotated protein.
    
  0.731
GCA_000377665_02165
Unannotated protein.
    
  0.724
GCA_000377665_01044
Unannotated protein.
    
  0.714
GCA_000377665_01531
Unannotated protein.
    
  0.714
Your Current Organism:
Halomonas zhanjiangensis
NCBI taxonomy Id: 574966
Other names: H. zhanjiangensis DSM 21076, Halomonas sp. JSM 078169, Halomonas zhanjiangensis DSM 21076
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.