STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_0015Hypothetical protein; KEGG: mno:Mnod_6296 glycosyl transferase family 2; SPTR: Glycosyl transferase family 2. (558 aa)    
Predicted Functional Partners:
Isop_0016
KEGG: eba:ebA1583 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.777
Isop_3692
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyc:PCC7424_1248 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Domain of unknown function (DUF3495); Glycosyl transferases group 1.
  
     0.591
Isop_2654
KEGG: nwa:Nwat_1803 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.474
Isop_2285
COGs: COG1657 Squalene cyclase; InterPro IPR006400: IPR018333: IPR001330; KEGG: psl:Psta_1738 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; PRIAM: Squalene--hopene cyclase; SPTR: Squalene-hopene cyclase; TIGRFAM: squalene-hopene cyclase; squalene/oxidosqualene cyclase; PFAM: Prenyltransferase and squalene oxidase repeat; TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase.
  
     0.468
Isop_1743
Ceramide glucosyltransferase; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; KEGG: tye:THEYE_A1783 ceramide glucosyltransferase, putative; PRIAM: Ceramide glucosyltransferase; SPTR: Ceramide glucosyltransferase, putative; TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI.
  
     0.444
Isop_1196
COGs: COG3008 Paraquat-inducible protein B; InterPro IPR007498: IPR003399; KEGG: abo:ABO_2405 PqiB family protein; PFAM: Paraquat-inducible protein A; Mammalian cell entry related domain protein; SPTR: Mce related protein; PFAM: mce related protein; Paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family.
  
     0.443
Isop_0989
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: rrs:RoseRS_0386 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2.
  
     0.438
Isop_2284
Hopanoid biosynthesis associated radical SAM protein HpnH; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR017833: IPR007197; KEGG: ppd:Ppro_1192 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Molybdenum cofactor biosynthesis protein A; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM superfamily; Domain of unknown function (DUF3463); TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH.
  
     0.425
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.