STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Isop_0047Protein-disulfide reductase; COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR017936; KEGG: plm:Plim_0535 cytochrome c biogenesis protein transmembrane region; PRIAM: Protein-disulfide reductase; SPTR: Cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome C biogenesis protein transmembrane region; Protein of unknown function, DUF255. (956 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.772
msrB
methionine-R-sulfoxide reductase; COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: tel:tlr1214 methionine sulfoxide reductase B; PFAM: Methionine sulfoxide reductase B; PRIAM: Peptide-methionine (R)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrB; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase.
   
 
 0.772
Isop_0621
InterPro IPR000866: IPR017936; KEGG: tgr:Tgr7_0547 peroxiredoxin-like protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Peroxiredoxin-like protein; PFAM: AhpC/TSA family.
 
 
 0.739
Isop_2138
GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: afr:AFE_0805 auxin-responsive GH3-related protein; PFAM: GH3 auxin-responsive promoter; SPTR: Auxin-responsive GH3-related protein; PFAM: GH3 auxin-responsive promoter.
  
     0.725
Isop_2379
Redoxin domain protein; InterPro IPR017937: IPR013740: IPR000866: IPR017936; KEGG: ote:Oter_0137 redoxin domain-containing protein; PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family.
 
 
 0.705
Isop_0103
KEGG: slo:Shew_0685 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.697
Isop_2189
InterPro IPR017937: IPR000866: IPR017936; KEGG: ote:Oter_2095 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family.
 
 
 0.689
Isop_0611
Redoxin domain protein; COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR013740: IPR017936: IPR017937: IPR006650; KEGG: son:SO_0269 thioredoxin, putative; PFAM: Redoxin domain protein; SPTR: Thioredoxin, putative; PFAM: Redoxin.
 
 
 0.655
Isop_0314
Redoxin domain protein; InterPro IPR013740: IPR009056: IPR017936; KEGG: psl:Psta_2862 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Redoxin domain protein; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: Copper type II ascorbate-dependent monooxygenase, C-terminal domain; Redoxin.
 
 
 0.653
Isop_3033
Redoxin domain protein; InterPro IPR017937: IPR017936: IPR013740; KEGG: rru:Rru_A0398 thiol-disulfide isomerase and thioredoxins-like; PFAM: Redoxin domain protein; SPTR: Thiol-disulfide isomerase and thioredoxins-like; PFAM: Redoxin.
 
 
 0.653
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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