STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_0077Abortive infection protein; InterPro IPR003675; KEGG: noc:Noc_1193 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family. (235 aa)    
Predicted Functional Partners:
Isop_2989
Hypothetical protein; KEGG: hha:Hhal_1736 putative ABC transporter; SPTR: Putative ABC transporter.
  
     0.688
Isop_3588
COGs: COG4446 conserved hypothetical protein; InterPro IPR010865; KEGG: ana:all1003 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1499).
  
     0.554
Isop_2654
KEGG: nwa:Nwat_1803 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.552
Isop_0075
KEGG: pan:PODANSg8032 hypothetical protein; SPTR: Chromosome 10 SCAF15123, whole genome shotgun sequence.
       0.487
Isop_0076
Heat shock protein 70; COGs: COG0443 Molecular chaperone; InterPro IPR001023: IPR018181: IPR013126; KEGG: cac:CA_C0472 HSP70/DnaK family protein; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; PFAM: Hsp70 protein.
       0.487
Isop_3520
KEGG: htu:Htur_4304 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.436
Isop_1012
InterPro IPR015259; KEGG: psl:Psta_2659 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Methylene-tetrahydromethanopterin dehydrogenase; PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+)); SPTR: Methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal.
  
     0.427
Isop_0892
ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525: IPR000412; KEGG: aba:Acid345_0285 ABC multidrug efflux pump, inner membrane subunit; PFAM: ABC-2 type transporter; SPTR: ABC multidrug efflux pump, inner membrane subunit; PFAM: ABC-2 type transporter.
   
    0.402
Isop_1156
ABC-2 type transporter; InterPro IPR000412: IPR013525: IPR013526; KEGG: maq:Maqu_1098 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter.
   
    0.402
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.