Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_0204KEGG: mac:MA3428 hypothetical protein; SPTR: Putative uncharacterized protein. (159 aa)    
Predicted Functional Partners:
Isop_0287
Amidohydrolase 2; COGs: COG1904 Glucuronate isomerase; KEGG: plm:Plim_2160 amidohydrolase 2; SPTR: Putative uncharacterized protein; PFAM: Glucuronate isomerase.
  
     0.743
Isop_2618
InterPro IPR003400; KEGG: plm:Plim_3761 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR.
  
     0.742
Isop_0202
KEGG: plm:Plim_3249 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.734
Isop_0359
KEGG: plm:Plim_0766 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.712
Isop_2987
KEGG: psl:Psta_3111 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.694
Isop_2134
KEGG: cma:Cmaq_1622 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.691
Isop_0745
KEGG: psl:Psta_2460 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.679
Isop_1364
Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: rba:RB12167 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Putative uncharacterized protein.
  
     0.673
Isop_3110
KEGG: plm:Plim_0161 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559).
  
     0.667
Isop_0849
KEGG: psl:Psta_2453 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.664
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.