STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_0241Hypothetical protein; KEGG: chu:CHU_3727 b-glycosidase, CBM9 module, glycoside hydrolase family 8 protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1083). (378 aa)    
Predicted Functional Partners:
Isop_0242
KEGG: plm:Plim_0217 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.441
Isop_0240
Von Willebrand factor type A; COGs: COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; InterPro IPR002035: IPR013694: IPR006587; KEGG: psl:Psta_0406 von Willebrand factor type A; PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain-containing protein; SMART: von Willebrand factor type A; Vault protein inter-alpha-trypsin, metazoa; SPTR: Inter-alpha-trypsin inhibitor family heavy chain-related protein-hypothetical secreted or membrane-associated; PFAM: Vault protein inter-alpha-trypsin; von Willebrand factor type A domain.
       0.418
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.