STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_0259Hypothetical protein; KEGG: hau:Haur_4998 Na-Ca exchanger/integrin-beta4; SPTR: Putative uncharacterized protein. (936 aa)    
Predicted Functional Partners:
Isop_1806
Conserved repeat domain protein; InterPro IPR006626: IPR003644: IPR001434: IPR002884; KEGG: hau:Haur_4998 Na-Ca exchanger/integrin-beta4; PFAM: Proprotein convertase P; SMART: Na-Ca exchanger/integrin-beta4; Parallel beta-helix repeat; SPTR: Integrin alpha chain; TIGRFAM: conserved repeat domain protein; PFAM: Calx-beta domain; Proprotein convertase P-domain; TIGRFAM: conserved repeat domain.
  
 
   0.763
Isop_1073
Peptidase S8 and S53 subtilisin kexin sedolisin; COGs: COG4935 Regulatory P domain of the subtilisin-like proprotein convertase and other protease; InterPro IPR000209: IPR002884; KEGG: mar:MAE_12430 hypothetical protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Proprotein convertase P; SPTR: Putative uncharacterized protein; PFAM: Proprotein convertase P-domain; Subtilase family.
  
 
 0.585
Isop_2330
FG-GAP repeat protein; InterPro IPR013519: IPR013517; KEGG: noc:Noc_2093 integrins alpha chain; PFAM: FG-GAP repeat protein; SMART: Integrin alpha beta-propellor repeat protein; SPTR: Integrins alpha chain.
  
     0.502
Isop_3540
Hypothetical protein; KEGG: srm:SRM_02025 conserved hypothetical protein, membrane; SPTR: Putative uncharacterized protein.
  
 
   0.482
Isop_2275
InterPro IPR001623; KEGG: tcu:Tcur_1396 fibronectin type III domain protein; PFAM: heat shock protein DnaJ domain protein; SPTR: Fibronectin type III domain protein.
  
    0.466
Isop_0054
Multi antimicrobial extrusion protein MatE; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002528; KEGG: gbm:Gbem_1791 polysaccharide biosynthesis protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein.
  
     0.462
Isop_2254
KEGG: aba:Acid345_4727 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.450
Isop_3404
Hypothetical protein; InterPro IPR018247; KEGG: hwa:HQ1193A cell surface glycoprotein; SPTR: Probable cell surface glycoprotein; PFAM: Subtilase family.
  
     0.449
Isop_1681
Methyltransferase type 11; InterPro IPR013216; KEGG: gsu:GSU0628 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Conserved domain protein; PFAM: Methyltransferase domain.
  
     0.441
Isop_0835
Hypothetical protein; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: hau:Haur_0806 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.429
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.