STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_0281InterPro IPR011444: IPR010869; KEGG: psl:Psta_3333 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); Protein of unknown function (DUF1549). (288 aa)    
Predicted Functional Partners:
Isop_1296
InterPro IPR011444; KEGG: plm:Plim_0522 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.774
Isop_0280
Beta-lactamase domain-containing protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: pvi:Cvib_1640 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family.
       0.773
Isop_3616
Protein of unknown function DUF1549; InterPro IPR011444; KEGG: rba:RB12567 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.773
Isop_3551
Protein of unknown function DUF1549; InterPro IPR003343: IPR011444; KEGG: sus:Acid_5709 hypothetical protein; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.739
Isop_0817
InterPro IPR003343: IPR011444; KEGG: psl:Psta_3533 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.733
Isop_3066
InterPro IPR011444; KEGG: dfe:Dfer_1040 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
 
     0.732
Isop_0027
InterPro IPR003343: IPR011444; KEGG: plm:Plim_4094 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.728
Isop_3133
NHL repeat containing protein; InterPro IPR006311: IPR017909: IPR001258; KEGG: psl:Psta_2952 NHL repeat containing protein; PFAM: NHL repeat containing protein; SPTR: Twin-arginine translocation pathway signal; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
     0.728
Isop_2524
Protein of unknown function DUF1549; InterPro IPR003343: IPR011444; KEGG: sus:Acid_5709 hypothetical protein; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.727
Isop_3524
InterPro IPR003343: IPR011444; KEGG: psl:Psta_2092 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
     0.636
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.