STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_0290COGs: COG3379 conserved hypothetical protein; InterPro IPR001917: IPR002591; KEGG: hoh:Hoch_2285 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase. (625 aa)    
Predicted Functional Partners:
Isop_0289
Hypothetical protein; KEGG: cdi:DIP0357 putative secreted bifunctional (alpha-amylase and endo-alpha-glucosidase): starch degradation and integral membrane protein; SPTR: Putative secreted bifunctional (Alpha-amylase and endo-alpha-glucosidase): starch degradation and integral membrane protein.
       0.773
Isop_0291
Hypothetical protein; KEGG: psb:Psyr_1958 non-ribosomal peptide synthase:amino acid adenylation; SPTR: Non-ribosomal peptide synthase:Amino acid adenylation.
       0.773
Isop_3045
KEGG: dsh:Dshi_1950 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.739
Isop_0104
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: chl:Chy400_1467 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase.
  
     0.531
Isop_3680
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: chl:Chy400_1467 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase.
  
     0.513
Isop_1428
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: htu:Htur_3376 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase.
  
     0.489
Isop_2559
Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: sus:Acid_6183 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase.
  
     0.481
Isop_2439
KEGG: oan:Oant_0214 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.478
Isop_0957
KEGG: sus:Acid_6147 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362).
  
     0.454
Isop_0844
Hypothetical protein; InterPro IPR001901; KEGG: plm:Plim_0565 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.441
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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