STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Isop_0397COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468: IPR009056; KEGG: sru:SRU_0323 cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: Cytochrome c oxidase mono-heme subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II. (231 aa)    
Predicted Functional Partners:
Isop_0396
Cytochrome-c oxidase; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883; KEGG: srm:SRM_00402 cytochrome c oxidase subunit 1; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Putative cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I.
 0.999
Isop_0561
Cytochrome-c oxidase; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883; KEGG: psl:Psta_3513 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I.
 0.995
Isop_0865
Hypothetical protein; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; KEGG: srm:SRM_00402 cytochrome c oxidase subunit 1; SPTR: Putative cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
 
 0.995
Isop_0398
Cytochrome c class I; InterPro IPR003088: IPR008168: IPR009056; KEGG: caa:Caka_0027 cytochrome c class I; PFAM: cytochrome c class I; SPTR: Cytochrome c class I; PFAM: Cytochrome c.
 
   0.930
Isop_0562
COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468; KEGG: psl:Psta_3512 cytochrome c oxidase mono-heme subunit/FixO; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: Cytochrome C oxidase mono-heme subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
  
  
 
0.928
Isop_0868
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.909
Isop_0869
COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: psl:Psta_2929 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I; SPTR: Cytochrome c oxidase subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I; Belongs to the heme-copper respiratory oxidase family.
    
 0.907
Isop_0777
COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468: IPR009056; KEGG: min:Minf_1953 Cbb3-type cytochrome oxidase, cytochrome c subunit; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: Cytochrome C oxidase, mono-heme subunit/FixO superfamily; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
  
  
 
0.905
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
    
 0.905
Isop_0872
Cytochrome-c oxidase; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298: IPR020606; KEGG: hwa:HQ2352A cytochrome-C-like terminal oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome-c-like terminal oxidase, subunit III; PFAM: Cytochrome c oxidase subunit III.
    
 0.904
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.