STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Isop_0540ATPase associated with various cellular activities AAA_5; COGs: COG0714 MoxR-like ATPase; InterPro IPR011704: IPR003593; KEGG: mxa:MXAN_2895 AAA family ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: ATPase, AAA family; PFAM: AAA domain (dynein-related subfamily). (353 aa)    
Predicted Functional Partners:
Isop_0537
Repeat-companion domain protein; InterPro IPR003590: IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996.
 
     0.783
Isop_0543
AAA ATPase central domain protein; COGs: COG0465 ATP-dependent Zn protease; InterPro IPR003959: IPR000642: IPR003593: IPR003960; KEGG: mxa:MXAN_2898 ATP-dependent metalloprotease FtsH; PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase; SPTR: ATP-dependent metalloprotease, FtsH family; PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); Belongs to the AAA ATPase family.
 
     0.642
Isop_0391
Repeat-companion domain protein; InterPro IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996.
  
     0.587
Isop_0539
KEGG: mxa:MXAN_2893 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.565
Isop_2646
Dual specificity protein phosphatase; InterPro IPR000387: IPR000340; KEGG: olu:OSTLU_7942 predicted protein; PFAM: Dual specificity protein phosphatase; SPTR: Predicted protein; PFAM: Dual specificity phosphatase, catalytic domain.
  
     0.550
Isop_1005
Protein of unknown function DUF1464; COGs: COG2441 butyrate kinase; InterPro IPR009927; KEGG: pfu:PF1187 hypothetical protein; PFAM: protein of unknown function DUF1464; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1464).
  
     0.542
Isop_0541
KEGG: mxa:MXAN_2896 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.520
Isop_1499
COGs: COG0433 ATPase; InterPro IPR003593; KEGG: scl:sce5407 hypothetical protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF87.
  
     0.518
Isop_3202
Hypothetical protein; KEGG: ttu:TERTU_3103 putative type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Putative type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase.
  
     0.509
Isop_2897
KEGG: mxa:MXAN_7038 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.494
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.