STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tatATwin-arginine translocation protein, TatA/E family subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (123 aa)    
Predicted Functional Partners:
tatC
Sec-independent protein translocase, TatC subunit; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
  
 0.955
Isop_0687
InterPro IPR003369; KEGG: plm:Plim_2724 twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Putative Sec-independent protein translocase component; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family.
 
  
 
0.952
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.860
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
  
  
 0.525
Isop_0783
COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896; KEGG: ote:Oter_3934 Fe-S-cluster-containing hydrogenase components 1-like protein; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit.
  
 
 0.478
Isop_0832
Rhomboid family protein; COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: bse:Bsel_2310 rhomboid protease; PFAM: Rhomboid family protein; SPTR: Rhomboid protease; PFAM: Rhomboid family.
   
 
 0.468
Isop_0852
Rhomboid family protein; COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: mmh:Mmah_1165 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: Cytoplasmic membrane protein; PFAM: Rhomboid family.
   
 
 0.468
Isop_1315
Rhomboid family protein; COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: nmu:Nmul_A2462 rhomboid-like protein; PFAM: Rhomboid family protein; SPTR: Rhomboid family protein; PFAM: Rhomboid family.
   
 
 0.468
Isop_2847
Rhomboid family protein; COGs: COG0705 membrane protein; InterPro IPR013838: IPR002610; KEGG: plm:Plim_1385 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: Probable glpG protein; PFAM: Protein of unknown function (DUF3582); Rhomboid family.
   
 
 0.468
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.