STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_0765KEGG: pin:Ping_1259 gas vesicle protein G; SPTR: Gas vesicle protein G; PFAM: Gas vesicle protein G. (103 aa)    
Predicted Functional Partners:
Isop_0762
Gas vesicle K; InterPro IPR007805; KEGG: aba:Acid345_2406 gas vesicle K; PFAM: Gas vesicle K; SPTR: Gas vesicle protein K; PFAM: Gas vesicle protein K.
     
 0.666
Isop_0766
Gas vesicle synthesis GvpLGvpF; InterPro IPR009430; KEGG: mxa:MXAN_2769 GvpL/GvpF family gas vesicle protein; PFAM: Gas vesicle synthesis GvpLGvpF; SPTR: Putative gas vesicle synthesis GvpLGvpF; PFAM: Gas vesicle synthesis protein GvpL/GvpF.
     
 0.630
Isop_0763
Gas vesicle protein GVPa; InterPro IPR000638; KEGG: pin:Ping_1260 gas vesicle protein GVPa; PFAM: gas vesicle protein GVPa; SPTR: Gas vesicle protein GVPa; PFAM: Gas vesicle protein.
       0.601
Isop_0764
KEGG: lbc:LACBIDRAFT_304787 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.570
Isop_0760
Gas vesicle protein GVPa; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
     
 0.508
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.