STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_0767Hypothetical protein; KEGG: xcv:XCV2837 translation initiation factor IF-2; SPTR: Translation initiation factor IF-2. (141 aa)    
Predicted Functional Partners:
Isop_0768
Gas vesicle protein GvpN; COGs: COG0714 MoxR-like ATPase; InterPro IPR011704: IPR013462: IPR003593; KEGG: cya:CYA_0826 gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: Gas vesicle protein GvpN; TIGRFAM: gas vesicle protein GvpN; PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal; TIGRFAM: gas vesicle protein GvpN.
       0.773
Isop_0766
Gas vesicle synthesis GvpLGvpF; InterPro IPR009430; KEGG: mxa:MXAN_2769 GvpL/GvpF family gas vesicle protein; PFAM: Gas vesicle synthesis GvpLGvpF; SPTR: Putative gas vesicle synthesis GvpLGvpF; PFAM: Gas vesicle synthesis protein GvpL/GvpF.
       0.435
Isop_0769
KEGG: nca:Noca_1794 hypothetical protein; SPTR: Predicted protein.
       0.406
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.