STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_0929KEGG: psl:Psta_0367 hypothetical protein; SPTR: Putative uncharacterized protein. (619 aa)    
Predicted Functional Partners:
Isop_0930
InterPro IPR007527; KEGG: psl:Psta_0368 zinc finger SWIM domain protein; SPTR: Zinc finger SWIM domain protein.
       0.572
Isop_0928
COGs: COG0714 MoxR-like ATPase; InterPro IPR011704; KEGG: psl:Psta_0366 ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities AAA_5; SPTR: ATPase associated with various cellular activities AAA_5; PFAM: AAA domain (dynein-related subfamily).
       0.476
Isop_0927
Hypothetical protein; InterPro IPR002092; KEGG: psl:Psta_0365 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.470
Isop_0926
InterPro IPR008912; KEGG: psl:Psta_0364 VWA containing CoxE family protein; PFAM: VWA containing CoxE family protein; SPTR: VWA containing CoxE family protein; PFAM: VWA domain containing CoxE-like protein.
       0.418
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.