STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_0978Peptidase S8 and S53 subtilisin kexin sedolisin; InterPro IPR000209: IPR018247; KEGG: mar:MAE_50880 hypothetical protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Putative uncharacterized protein; PFAM: Subtilase family. (1093 aa)    
Predicted Functional Partners:
Isop_1073
Peptidase S8 and S53 subtilisin kexin sedolisin; COGs: COG4935 Regulatory P domain of the subtilisin-like proprotein convertase and other protease; InterPro IPR000209: IPR002884; KEGG: mar:MAE_12430 hypothetical protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Proprotein convertase P; SPTR: Putative uncharacterized protein; PFAM: Proprotein convertase P-domain; Subtilase family.
 
 
 0.715
Isop_0528
InterPro IPR000209; KEGG: cyt:cce_1400 hypothetical protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Major intracellular serine protease; PFAM: Subtilase family.
  
 
   0.627
Isop_3404
Hypothetical protein; InterPro IPR018247; KEGG: hwa:HQ1193A cell surface glycoprotein; SPTR: Probable cell surface glycoprotein; PFAM: Subtilase family.
  
     0.502
Isop_0016
KEGG: eba:ebA1583 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.491
Isop_0977
Hypothetical protein; KEGG: ske:Sked_36150 putative collagen-binding protein; SPTR: Putative collagen-binding protein.
       0.477
Isop_0788
Abortive infection protein; InterPro IPR003675; KEGG: rba:RB10877 hypothetical protein; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; PFAM: CAAX amino terminal protease family.
  
     0.453
Isop_3540
Hypothetical protein; KEGG: srm:SRM_02025 conserved hypothetical protein, membrane; SPTR: Putative uncharacterized protein.
  
 
   0.449
Isop_0549
KEGG: rba:RB10354 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.445
Isop_2474
InterPro IPR013249: IPR014284; KEGG: psl:Psta_3331 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
  
 
   0.438
Isop_3335
Peptidase S8 and S53 subtilisin kexin sedolisin; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: bba:Bd0029 subtilase; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Cna protein B-type domain; PFAM: Subtilase family; Belongs to the peptidase S8 family.
  
 
   0.433
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.