Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Isop_0324 | Isop_1017 | Isop_0324 | Isop_1017 | Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: psl:Psta_2870 peptidase M24; PFAM: peptidase M24; SPTR: Peptidase M24; PFAM: Metallopeptidase family M24. | Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587: IPR000994; KEGG: plm:Plim_1634 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Proline dipeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain. | 0.735 |
Isop_0324 | guaB | Isop_0324 | Isop_2659 | Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: psl:Psta_2870 peptidase M24; PFAM: peptidase M24; SPTR: Peptidase M24; PFAM: Metallopeptidase family M24. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.608 |
Isop_1016 | Isop_1017 | Isop_1016 | Isop_1017 | Protein of unknown function DUF140; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: sit:TM1040_1780 hypothetical protein; PFAM: protein of unknown function DUF140; SPTR: Membrane protein; PFAM: Domain of unknown function DUF140. | Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587: IPR000994; KEGG: plm:Plim_1634 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Proline dipeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain. | 0.487 |
Isop_1017 | Isop_0324 | Isop_1017 | Isop_0324 | Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587: IPR000994; KEGG: plm:Plim_1634 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Proline dipeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain. | Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: psl:Psta_2870 peptidase M24; PFAM: peptidase M24; SPTR: Peptidase M24; PFAM: Metallopeptidase family M24. | 0.735 |
Isop_1017 | Isop_1016 | Isop_1017 | Isop_1016 | Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587: IPR000994; KEGG: plm:Plim_1634 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Proline dipeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain. | Protein of unknown function DUF140; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: sit:TM1040_1780 hypothetical protein; PFAM: protein of unknown function DUF140; SPTR: Membrane protein; PFAM: Domain of unknown function DUF140. | 0.487 |
Isop_1017 | grpE | Isop_1017 | Isop_1018 | Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587: IPR000994; KEGG: plm:Plim_1634 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Proline dipeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain. | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | 0.436 |
Isop_1017 | guaB | Isop_1017 | Isop_2659 | Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587: IPR000994; KEGG: plm:Plim_1634 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Proline dipeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.608 |
grpE | Isop_1017 | Isop_1018 | Isop_1017 | GrpE protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...] | Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587: IPR000994; KEGG: plm:Plim_1634 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Proline dipeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain. | 0.436 |
guaB | Isop_0324 | Isop_2659 | Isop_0324 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: psl:Psta_2870 peptidase M24; PFAM: peptidase M24; SPTR: Peptidase M24; PFAM: Metallopeptidase family M24. | 0.608 |
guaB | Isop_1017 | Isop_2659 | Isop_1017 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Peptidase M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587: IPR000994; KEGG: plm:Plim_1634 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Proline dipeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain. | 0.608 |