Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Isop_1201 | Isop_1202 | Oligopeptidase B; COGs: COG1770 Protease II; InterPro IPR004106: IPR002470; KEGG: sus:Acid_3709 oligopeptidase B; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; PRIAM: Oligopeptidase B; SPTR: Oligopeptidase B; PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family. | Hypothetical protein; KEGG: cfa:485022 KH-type splicing regulatory protein; SPTR: Whole genome shotgun sequence assembly, scaffold_139. | 0.408 |
Isop_1202 | Isop_1201 | Hypothetical protein; KEGG: cfa:485022 KH-type splicing regulatory protein; SPTR: Whole genome shotgun sequence assembly, scaffold_139. | Oligopeptidase B; COGs: COG1770 Protease II; InterPro IPR004106: IPR002470; KEGG: sus:Acid_3709 oligopeptidase B; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; PRIAM: Oligopeptidase B; SPTR: Oligopeptidase B; PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family. | 0.408 |