STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
Isop_1253Serine/threonine-protein kinase-like domain protein; InterProIPR019734: IPR000719: IPR013026: IPR017442: IPR 001440; KEGG: dal:Dalk_5269 TPR repeat-containing protein; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; PFAM: Protein kinase domain; Tetratricopeptide repeat. (979 aa)    
Predicted Functional Partners:
Isop_0879
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG3914 O-linked N-acetylglucosamine transferase SPINDLY family; InterPro IPR001440: IPR019734: IPR013026; KEGG: ote:Oter_3958 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.
 
   0.714
Isop_3676
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG0457 FOG: TPR repeat; InterPro IPR019734: IPR013026: IPR001440; KEGG: pcs:Pc22g03720 Pc22g03720; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Pc22g03720 protein; PFAM: Tetratricopeptide repeat.
 
 
 0.670
Isop_1254
COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR008271: IPR020635: IPR 002290; KEGG: rca:Rcas_0525 TPR repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine-protein kinase; PFAM: Protein kinase domain.
 
     0.646
Isop_1872
InterPro IPR001440: IPR019734: IPR013026; KEGG: rpt:Rpal_2530 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.
 
   0.617
Isop_0125
InterPro IPR019734: IPR013026: IPR001440; KEGG: cyb:CYB_1571 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat protein.
  
     0.616
Isop_1255
Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
       0.594
Isop_2236
InterPro IPR019734: IPR001440: IPR013026; KEGG: mxa:MXAN_6419 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR domain protein.
 
   0.521
Isop_1702
Tetratricopeptide TPR_1 repeat-containing protein; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734: IPR013026: IPR001440; KEGG: cyp:PCC8801_1300 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein.
 
  
 0.513
Isop_0090
Diguanylate cyclase; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000253: IPR000160; KEGG: afw:Anae109_4141 diguanylate cyclase; PFAM: GGDEF domain containing protein; Forkhead-associated protein; SMART: GGDEF domain containing protein; Forkhead-associated protein; SPTR: Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; FHA domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 
 0.475
Isop_3550
Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160: IPR000253: IPR005829; KEGG: hoh:Hoch_5913 diguanylate cyclase; PFAM: GGDEF domain containing protein; Forkhead-associated protein; SMART: GGDEF domain containing protein; Forkhead-associated protein; SPTR: Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; FHA domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 
 0.450
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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