Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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Isop_1752Mammalian cell entry related domain protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: psl:Psta_2134 mammalian cell entry related domain protein; PFAM: Mammalian cell entry related domain protein; SPTR: Putative uncharacterized protein; PFAM: mce related protein. (372 aa)    
Predicted Functional Partners:
Isop_1751
ABC transporter related protein; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: psl:Psta_2135 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
  
 0.981
Isop_1750
Protein of unknown function DUF140; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: psl:Psta_2136 protein of unknown function DUF140; PFAM: protein of unknown function DUF140; SPTR: Probable permease of ABC transporter; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
  
 0.973
Isop_1016
Protein of unknown function DUF140; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: sit:TM1040_1780 hypothetical protein; PFAM: protein of unknown function DUF140; SPTR: Membrane protein; PFAM: Domain of unknown function DUF140.
  
 0.944
Isop_2586
Mammalian cell entry related domain protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: tye:THEYE_A0330 mce-related protein; PFAM: Mammalian cell entry related domain protein; SPTR: Mce-related protein; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein.
  
  
  0.937
Isop_3075
Forkhead-associated protein; InterPro IPR000253; KEGG: psl:Psta_2714 pyrrolo-quinoline quinone; PFAM: Forkhead-associated protein; SPTR: Putative uncharacterized protein.
  
    0.752
Isop_3658
InterPro IPR001434; KEGG: psl:Psta_4233 conserved repeat domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved repeat domain protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain.
 
     0.750
Isop_3427
Hypothetical protein; InterPro IPR022272; KEGG: psl:Psta_2388 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.744
Isop_2047
InterPro IPR011521; KEGG: psl:Psta_1964 YTV domain protein; PFAM: YTV repeat-containing protein; SPTR: YTV domain protein; PFAM: YTV.
  
     0.735
Isop_0716
KEGG: rba:RB8980 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559).
  
     0.734
Isop_0018
KEGG: plm:Plim_0750 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.733
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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