STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Isop_1770Hypothetical protein; KEGG: nca:Noca_4359 ATPase domain-containing protein; SPTR: ATP-binding region, ATPase domain protein domain protein. (387 aa)    
Predicted Functional Partners:
Isop_2218
4-vinyl reductase 4VR; InterPro IPR004096; KEGG: cyp:PCC8801_1056 4-vinyl reductase 4VR; PFAM: 4-vinyl reductase 4VR; SPTR: 4-vinyl reductase 4VR; PFAM: V4R domain.
  
  
 0.669
Isop_2221
4-vinyl reductase 4VR; COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: tel:tll0856 hypothetical protein; PFAM: 4-vinyl reductase 4VR; SPTR: 4-vinyl reductase 4VR; PFAM: V4R domain.
  
  
 0.669
Isop_1771
Hypothetical protein; KEGG: psl:Psta_2465 MotA/TolQ/ExbB proton channel; SPTR: Probable biopolymer transport ExbB-related protein; PFAM: MotA/TolQ/ExbB proton channel family.
       0.511
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.