Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Isop_1843Hypothetical protein; KEGG: dgr:Dgri_GH24162 GH24162 gene product from transcript GH24162-RA; SPTR: Kinesin K39, putative (ISS). (370 aa)    
Predicted Functional Partners:
Isop_2664
KEGG: lma:LmjF34.0690 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
Isop_3593
KEGG: cpv:cgd5_2180 hypothetical protein; SPTR: Large low complexity protein with proline/alanine-rich repeat.
  
     0.666
Isop_0073
Hypothetical protein; InterPro IPR000209; KEGG: bja:blr0521 hypothetical protein; SPTR: Blr0521 protein.
  
     0.606
Isop_0044
COGs: COG0567 2-oxoglutarate dehydrogenase complex dehydrogenase (E1); InterPro IPR011603: IPR001017: IPR005475; KEGG: sfu:Sfum_3547 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region; dehydrogenase E1 component; PRIAM: Oxoglutarate dehydrogenase (succinyl-transferring); SPTR: 2-oxoglutarate dehydrogenase, E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component.
    
 
 0.537
Isop_2304
Repeat-companion domain protein; InterPro IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996.
  
     0.532
Isop_1432
Repeat-companion domain protein; InterPro IPR014338: IPR001611; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; PFAM: Leucine Rich Repeat; TIGRFAM: repeat-companion domain TIGR02996.
  
     0.497
Isop_3249
Hypothetical protein; InterPro IPR006162: IPR019734: IPR013026; KEGG: cag:Cagg_0357 tetratricopeptide TPR_2 repeat protein; SPTR: Tetratricopeptide TPR_2 repeat protein.
 
   0.473
Isop_1842
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: afw:Anae109_0804 multi-sensor signal transduction histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain.
  
    0.452
Isop_1550
Hypothetical protein; COGs: COG1196 Chromosome segregation ATPase; KEGG: lma:LmjF34.0690 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.425
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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