STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Isop_1978Sialate O-acetylesterase; InterPro IPR005181; KEGG: rba:RB10048 sialic acid-specific 9-O-acetylesterase; PFAM: protein of unknown function DUF303 acetylesterase; PRIAM: Sialate O-acetylesterase; SPTR: Sialic acid-specific 9-O-acetylesterase; PFAM: Domain of unknown function (DUF303). (497 aa)    
Predicted Functional Partners:
Isop_3649
COGs: COG0657 Esterase/lipase; KEGG: psl:Psta_3524 exported endo-1,4-beta-xylanase; SPTR: Xylanase; PFAM: Prolyl oligopeptidase family; alpha/beta hydrolase fold.
  
   
 0.740
Isop_3597
Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087: IPR017970; KEGG: plm:Plim_2575 lipolytic protein G-D-S-L family; PFAM: lipolytic protein G-D-S-L family; SPTR: Putative secreted protein; PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.664
Isop_1220
Protein of unknown function DUF1080; InterPro IPR010496; KEGG: rba:RB9196 secreted glycosyl hydrolase; PFAM: protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; PFAM: Domain of Unknown Function (DUF1080).
 
     0.543
Isop_2044
Hypothetical protein; InterPro IPR013424; KEGG: rba:RB4575 signal peptide; SPTR: Putative uncharacterized protein.
   
 
 0.501
Isop_2375
Dockerin type 1; InterPro IPR018247: IPR018242; KEGG: aba:Acid345_4018 integrin-like protein; PFAM: Dockerin type 1; SPTR: Integrin-like protein; PFAM: Dockerin type I repeat.
   
 
 0.501
Isop_2174
InterPro IPR010496; KEGG: psl:Psta_3759 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative large multi-functional protein; PFAM: Domain of Unknown Function (DUF1080).
  
     0.498
Isop_3578
Hypothetical protein; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: hau:Haur_4875 putative lipase/esterase; SPTR: Alpha/beta hydrolase domain-containing protein; PFAM: Prolyl oligopeptidase family.
  
     0.493
Isop_0502
Galactokinase; COGs: COG0153 Galactokinase; InterProIPR019539: IPR006204: IPR013750: IPR000705: IPR 006203: IPR006206; KEGG: rrs:RoseRS_3819 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein; SPTR: Galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
     0.475
Isop_1859
KEGG: sli:Slin_3037 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family.
  
     0.443
Isop_3656
Protein of unknown function DUF1080; InterPro IPR010496; KEGG: psl:Psta_2956 membrane-bound dehydrogenase domain protein; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080).
  
     0.437
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.