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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Isop_1985KEGG: plm:Plim_2121 hypothetical protein; SPTR: Putative uncharacterized protein. (309 aa)    
Predicted Functional Partners:
Isop_1986
KEGG: mdo:100024436 hypothetical protein LOC100024436; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily.
       0.636
Isop_0794
Small GTP-binding protein; COGs: COG1163 GTPase; InterPro IPR006073: IPR002917: IPR004095: IPR005225; KEGG: psl:Psta_1013 GTP-binding protein HSR1-related protein; PFAM: GTP-binding protein HSR1-related; TGS domain-containing protein; SPTR: GTP-binding protein HSR1-related protein; TIGRFAM: small GTP-binding protein; PFAM: GTPase of unknown function; TGS domain; TIGRFAM: small GTP-binding protein domain.
    
   0.603
Isop_1924
COGs: COG0372 Citrate synthase; InterPro IPR002020: IPR011278: IPR019810; KEGG: psl:Psta_3158 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; PRIAM: Citrate (Si)-synthase; SPTR: 2-methylcitrate synthase/citrate synthase II; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family.
    
   0.603
Isop_1983
Hypothetical protein; KEGG: htu:Htur_1455 pyrrolo-quinoline quinone; SPTR: Pyrrolo-quinoline quinone.
       0.601
Isop_1984
KEGG: plm:Plim_4245 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.601
Isop_1987
KEGG: aav:Aave_2261 hypothetical protein; SPTR: Beta-galactosidase family protein.
       0.600
Isop_1988
KEGG: bfo:BRAFLDRAFT_281325 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.600
Isop_1293
COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130: IPR011506: IPR001343; KEGG: psl:Psta_1955 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; Planctomycete extracellular domain protein; Hemolysin-type calcium-binding region; SPTR: Peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD.
   
 
 0.572
Isop_1521
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.572
Isop_1982
KEGG: pno:SNOG_05675 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.524
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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