STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_1990Hypothetical protein; KEGG: sro:Sros_5147 phosphoenolpyruvate synthase; SPTR: Phosphoenolpyruvate synthase. (309 aa)    
Predicted Functional Partners:
Isop_1991
Hypothetical protein; KEGG: blo:BL1281 ribonuclease G; SPTR: Ribonuclease G.
       0.623
Isop_1989
KEGG: fal:FRAAL6684 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.531
Isop_1987
KEGG: aav:Aave_2261 hypothetical protein; SPTR: Beta-galactosidase family protein.
       0.442
Isop_1988
KEGG: bfo:BRAFLDRAFT_281325 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.442
Isop_1992
KEGG: rsq:Rsph17025_0363 hypothetical protein; SPTR: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase-like protein.
       0.428
Isop_1986
KEGG: mdo:100024436 hypothetical protein LOC100024436; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily.
       0.420
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.