STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_2014InterPro IPR007341; KEGG: cli:Clim_0730 transglycosylase-associated protein; PFAM: Transglycosylase-associated protein; SPTR: Transglycosylase-associated protein; PFAM: Transglycosylase associated protein. (82 aa)    
Predicted Functional Partners:
Isop_1456
Methyltransferase; COGs: COG4301 conserved hypothetical protein; InterPro IPR017804: IPR019257; KEGG: npu:Npun_F2219 hypothetical protein; PFAM: Protein of unknown function DUF2260; SPTR: Putative uncharacterized protein; TIGRFAM: methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase.
   
    0.617
Isop_2013
COGs: COG3386 Gluconolactonase; InterPro IPR000801: IPR013658: IPR005511; KEGG: plm:Plim_2162 SMP-30/gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; esterase; SPTR: SMP-30/Gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; Putative esterase.
  
    0.407
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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