STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_2179COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR000169: IPR008257; KEGG: psl:Psta_1911 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase; PRIAM: Membrane dipeptidase; SPTR: Membrane dipeptidase; PFAM: Membrane dipeptidase (Peptidase family M19). (456 aa)    
Predicted Functional Partners:
Isop_0162
Peptidase C26; COGs: COG2071 glutamine amidotransferase; InterPro IPR017926: IPR011697; KEGG: gau:GAU_1361 glutamine amidotransferase class-I family protein; PFAM: peptidase C26; SPTR: Glutamine amidotransferase class-I family protein; PFAM: Peptidase C26.
     0.857
Isop_3590
Peptidase C26; COGs: COG2071 glutamine amidotransferase; InterPro IPR017926: IPR011697; KEGG: psl:Psta_2837 peptidase C26; PFAM: peptidase C26; SPTR: Peptidase C26; PFAM: Peptidase C26.
     0.563
Isop_2178
KEGG: plm:Plim_2074 hypothetical protein; SPTR: Probable xanthan lyase.
       0.501
Isop_1174
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466: IPR001586; KEGG: srm:SRM_02930 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase.
 
    0.463
Isop_1261
Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: tte:TTE0530 imidazolonepropionase and related amidohydrolase; PFAM: amidohydrolase; SPTR: Imidazolonepropionase and related amidohydrolases; PFAM: Amidohydrolase family.
 
     0.443
Isop_2261
COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: aba:Acid345_3078 gamma-glutamyltransferase 2; PFAM: gamma-glutamyltranspeptidase; PRIAM: Gamma-glutamyltransferase; SPTR: Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase.
 
  
 0.434
Isop_1260
Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: ami:Amir_0524 amidohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase; PFAM: Amidohydrolase family.
 
     0.432
Isop_3619
Beta-lactamase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
 
    0.407
Isop_1258
Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: dau:Daud_2020 amidohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase; PFAM: Amidohydrolase family.
 
     0.403
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.