STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_2249KEGG: psl:Psta_1030 endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase. (267 aa)    
Predicted Functional Partners:
Isop_2250
Isochorismatase hydrolase; COGs: COG1335 Amidase related to nicotinamidase; KEGG: sus:Acid_4520 isochorismatase hydrolase; SPTR: Isochorismatase hydrolase; PFAM: Isochorismatase family.
  
    0.713
Isop_0604
phospholipase/Carboxylesterase; InterPro IPR003140; KEGG: sus:Acid_1148 putative esterase; PFAM: phospholipase/Carboxylesterase; SPTR: Putative esterase; PFAM: Phospholipase/Carboxylesterase.
 
     0.670
Isop_2646
Dual specificity protein phosphatase; InterPro IPR000387: IPR000340; KEGG: olu:OSTLU_7942 predicted protein; PFAM: Dual specificity protein phosphatase; SPTR: Predicted protein; PFAM: Dual specificity phosphatase, catalytic domain.
  
     0.631
Isop_2747
Esterase; KEGG: psl:Psta_2350 esterase; SPTR: Putative uncharacterized protein.
  
     0.625
Isop_0601
KEGG: sus:Acid_4318 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.621
Isop_3202
Hypothetical protein; KEGG: ttu:TERTU_3103 putative type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Putative type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase.
  
     0.609
Isop_3161
KEGG: sus:Acid_4311 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.594
Isop_1499
COGs: COG0433 ATPase; InterPro IPR003593; KEGG: scl:sce5407 hypothetical protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF87.
  
     0.582
Isop_0134
Flp/Fap pilin component; InterPro IPR007047; KEGG: psl:Psta_2071 Flp/Fap pilin component; PFAM: Flp/Fap pilin component; SPTR: Flp/Fap pilin component; PFAM: Flp/Fap pilin component.
  
     0.564
Isop_1664
Hypothetical protein; KEGG: pna:Pnap_4853 signal peptide prediction; SPTR: Putative uncharacterized protein.
  
     0.545
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.