STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_2263KEGG: rba:RB2907 hypothetical protein; SPTR: Putative uncharacterized protein. (144 aa)    
Predicted Functional Partners:
Isop_3022
Hypothetical protein; InterPro IPR000983: IPR001120: IPR012902; KEGG: rba:RB11016 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.659
Isop_0452
Hypothetical protein; InterPro IPR012902: IPR001120; KEGG: plm:Plim_1302 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.654
Isop_3026
Hypothetical protein; InterPro IPR000897: IPR012902; KEGG: plm:Plim_3726 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.653
mcsB
ATP:guanido phosphotransferase; Catalyzes the specific phosphorylation of arginine residues in proteins; Belongs to the ATP:guanido phosphotransferase family.
  
     0.650
Isop_3470
UvrB/UvrC protein; COGs: COG3880 Uncharacterized protein with conserved CXXC pairs; InterPro IPR001943; KEGG: psl:Psta_3830 UvrB/UvrC protein; PFAM: UvrB/UvrC protein; SPTR: UvrB/UvrC protein; PFAM: UvrB/uvrC motif.
  
     0.613
Isop_2881
InterPro IPR019734: IPR013026: IPR001440; KEGG: plm:Plim_0675 tetratricopeptide domain protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide TPR_4.
  
     0.596
Isop_3053
Hypothetical protein; InterPro IPR012902; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.588
Isop_3469
COGs: COG3880 Uncharacterized protein with conserved CXXC pairs; KEGG: psl:Psta_3830 UvrB/UvrC protein; SPTR: UvrB/UvrC protein.
  
     0.586
Isop_1310
Hypothetical protein; InterPro IPR012902: IPR001120; KEGG: plm:Plim_2547 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
  
     0.567
Isop_2313
PEGA domain protein; InterPro IPR013229; KEGG: plm:Plim_2448 PEGA domain protein; PFAM: PEGA domain protein; SPTR: PEGA domain protein; PFAM: PEGA domain.
  
     0.556
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.