Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Isop_2361InterPro IPR011701; KEGG: vei:Veis_2436 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Probable transport transmembrane protein; PFAM: Major Facilitator Superfamily. (425 aa)    
Predicted Functional Partners:
Isop_2360
COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123: IPR018221; KEGG: plm:Plim_2369 AMP-dependent synthetase and ligase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: AMP-dependent synthetase and ligase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
       0.773
Isop_2359
COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR017441: IPR008271: IPR 017442: IPR000719; KEGG: psl:Psta_4044 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine protein kinase; PFAM: Protein kinase domain.
       0.450
Isop_0240
Von Willebrand factor type A; COGs: COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; InterPro IPR002035: IPR013694: IPR006587; KEGG: psl:Psta_0406 von Willebrand factor type A; PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain-containing protein; SMART: von Willebrand factor type A; Vault protein inter-alpha-trypsin, metazoa; SPTR: Inter-alpha-trypsin inhibitor family heavy chain-related protein-hypothetical secreted or membrane-associated; PFAM: Vault protein inter-alpha-trypsin; von Willebrand factor type A domain.
  
     0.422
Isop_3503
InterPro IPR008671; KEGG: mrb:Mrub_0382 lycopene beta and epsilon cyclase; PFAM: Lycopene beta and epsilon cyclase; SPTR: Lycopene cyclase, putative; PFAM: Lycopene cyclase protein; TIGRFAM: lycopene cyclase family protein.
  
  
 0.413
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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