STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_2375Dockerin type 1; InterPro IPR018247: IPR018242; KEGG: aba:Acid345_4018 integrin-like protein; PFAM: Dockerin type 1; SPTR: Integrin-like protein; PFAM: Dockerin type I repeat. (421 aa)    
Predicted Functional Partners:
Isop_2373
Protein of unknown function DUF1555; InterPro IPR013424: IPR011449; KEGG: rcu:RCOM_0136370 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Putative uncharacterized protein; TIGRFAM: PEP-CTERM putative exosortase interaction domain.
       0.596
Isop_2374
Hypothetical protein.
       0.596
Isop_0177
KEGG: eba:ebA4323 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.552
Isop_0178
KEGG: eba:ebA4323 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.552
Isop_0179
KEGG: eba:ebA4323 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.552
Isop_1978
Sialate O-acetylesterase; InterPro IPR005181; KEGG: rba:RB10048 sialic acid-specific 9-O-acetylesterase; PFAM: protein of unknown function DUF303 acetylesterase; PRIAM: Sialate O-acetylesterase; SPTR: Sialic acid-specific 9-O-acetylesterase; PFAM: Domain of unknown function (DUF303).
   
 
 0.552
Isop_3597
Lipolytic protein G-D-S-L family; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087: IPR017970; KEGG: plm:Plim_2575 lipolytic protein G-D-S-L family; PFAM: lipolytic protein G-D-S-L family; SPTR: Putative secreted protein; PFAM: GDSL-like Lipase/Acylhydrolase.
   
 
 0.552
Isop_0056
SCP-like extracellular; COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: ami:Amir_2074 SCP-like extracellular; PFAM: SCP-like extracellular; SPTR: Putative uncharacterized protein; PFAM: Cysteine-rich secretory protein family.
   
    0.473
Isop_0057
SCP-like extracellular; COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR019775: IPR014044; KEGG: ter:Tery_4644 allergen V5/TPX-1 related; PFAM: SCP-like extracellular; SPTR: SCP-like extracellular protein, putative; PFAM: Cysteine-rich secretory protein family.
   
    0.473
Isop_2682
Na-Ca exchanger/integrin-beta4; COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044: IPR003644; KEGG: dal:Dalk_4321 hypothetical protein; PFAM: Na-Ca exchanger/integrin-beta4; SCP-like extracellular; SMART: Na-Ca exchanger/integrin-beta4; SPTR: SCP-like extracellular protein, putative; PFAM: Cysteine-rich secretory protein family; Calx-beta domain.
   
    0.473
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.