Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_2395Hypothetical protein; KEGG: rpc:RPC_3182 peptidase C14, caspase catalytic subunit P20; SPTR: Peptidase C14, caspase catalytic subunit p20. (288 aa)    
Predicted Functional Partners:
Isop_2034
KEGG: cyh:Cyan8802_2208 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.515
Isop_1550
Hypothetical protein; COGs: COG1196 Chromosome segregation ATPase; KEGG: lma:LmjF34.0690 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.491
Isop_3672
Hypothetical protein; InterPro IPR005819; KEGG: pcs:Pc22g03720 Pc22g03720; SPTR: Pc22g03720 protein.
  
     0.433
Isop_2792
MJ0042 family finger-like protein; InterPro IPR019825: IPR011723; KEGG: lma:LmjF34.0690 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: MJ0042 family finger-like protein; TIGRFAM: MJ0042 family finger-like domain.
  
     0.432
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.