Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Isop_2563COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: bmj:BMULJ_03600 putative glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2. (353 aa)    
Predicted Functional Partners:
Isop_2564
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rca:Rcas_3522 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Mannosyltransferase; PFAM: Glycosyl transferases group 1.
 
    0.847
Isop_2567
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pca:Pcar_2590 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
    0.776
Isop_2565
KEGG: plm:Plim_0618 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1570).
       0.773
Isop_2566
Hypothetical protein; InterPro IPR008271; KEGG: plm:Plim_0617 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
       0.773
Isop_1053
ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR000412: IPR013525: IPR013526; KEGG: bts:Btus_0876 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter.
 
  
 0.529
Isop_3127
ABC-2 type transporter; COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR000412: IPR013525; KEGG: chl:Chy400_2271 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter.
 
  
 0.521
Isop_3129
Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702: IPR003856; KEGG: rce:RC1_4006 succinoglycan biosynthesis transport protein ExoP; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.455
Isop_1052
ABC transporter related protein; COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: gur:Gura_2358 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter.
 
  
 0.413
Isop_1475
Hypothetical protein; COGs: COG0438 Glycosyltransferase; KEGG: ami:Amir_3661 glycosyl transferase group 1; SPTR: Putative uncharacterized protein.
  
    0.413
Isop_3192
COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: gme:Gmet_2031 sugar transferase; PFAM: sugar transferase; SPTR: Sugar transferase, PEP-CTERM system associated; PFAM: Bacterial sugar transferase.
 
  
 0.412
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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