STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_2571Arsenical-resistance protein; COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR002657: IPR004706; KEGG: nde:NIDE3708 putative arsenite resistance protein ArsB; PFAM: Bile acid:sodium symporter; SPTR: Bile acid:sodium symporter; TIGRFAM: arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein. (373 aa)    
Predicted Functional Partners:
Isop_2572
KEGG: chu:CHU_1515 protein-tyrosine-phosphatase; SPTR: Probable arsenate reductase.
  
  
 0.762
Isop_3417
COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR006070: IPR017867: IPR000106; KEGG: plm:Plim_2592 protein-tyrosine phosphatase, low molecular weight; PFAM: Protein-tyrosine phosphatase, low molecular weight; SUA5/yciO/yrdC domain; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein-tyrosine phosphatase, low molecular weight; PFAM: Low molecular weight phosphotyrosine protein phosphatase; yrdC domain; Belongs to the SUA5 family.
  
  
 0.547
Isop_2573
InterPro IPR005243; KEGG: acp:A2cp1_1090 redox-active disulfide protein 2; SPTR: Redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; TIGRFAM: small redox-active disulfide protein 2.
     
 0.497
Isop_2570
KEGG: ani:AN6864.2 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.472
Isop_2575
KEGG: shw:Sputw3181_2951 cytochrome c biogenesis protein, transmembrane region; SPTR: Cytochrome c biogenesis protein, transmembrane region; PFAM: Cytochrome C biogenesis protein transmembrane region.
     
 0.406
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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