Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_2739NHL repeat containing protein; COGs: COG3386 Gluconolactonase; InterPro IPR013017: IPR001258; KEGG: rba:RB10820 ring finger protein HAC1; PFAM: NHL repeat containing protein; SPTR: Ring finger protein; PFAM: NHL repeat. (344 aa)    
Predicted Functional Partners:
Isop_2740
Protein of unknown function DUF1355; InterPro IPR002035: IPR010768; KEGG: psl:Psta_2128 von Willebrand factor type A; PFAM: protein of unknown function DUF1355; von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A; PFAM: von Willebrand factor type A domain; Protein of unknown function (DUF1355).
 
     0.741
Isop_0549
KEGG: rba:RB10354 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.621
Isop_3711
InterPro IPR006652; KEGG: plm:Plim_2580 kelch repeat-containing protein; PFAM: Kelch repeat type 1-containing protein; SMART: Kelch repeat type 1-containing protein; SPTR: Putative uncharacterized protein; PFAM: Kelch motif.
  
     0.584
Isop_2745
InterPro IPR002035; KEGG: psl:Psta_2131 von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A; PFAM: Aerotolerance regulator N-terminal.
  
     0.485
Isop_2288
InterPro IPR001258; KEGG: sus:Acid_1144 NHL repeat-containing protein; PFAM: NHL repeat containing protein; SPTR: Serine/threonine protein kinase; PFAM: NHL repeat.
 
     0.478
Isop_1343
Mov34/MPN/PAD-1 family protein; InterPro IPR000555; KEGG: psl:Psta_4145 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family protein; SPTR: Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family.
  
     0.467
Isop_3488
KEGG: psl:Psta_1964 YTV domain protein; SPTR: YTV domain protein.
  
     0.452
Isop_2160
Secretion protein HlyD family protein; InterPro IPR003997: IPR006143; KEGG: rba:RB10473 alkaline protease secretion protein AprE; PFAM: secretion protein HlyD family protein; SPTR: Similar to alkaline proteinase secretion protein aprE.
  
    0.451
Isop_1644
PDZ/DHR/GLGF domain protein; InterPro IPR001478; KEGG: rmr:Rmar_0910 glycosyl hydrolase BNR repeat-containing protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein; PFAM: BNR/Asp-box repeat.
 
    0.440
Isop_1870
KEGG: psl:Psta_4021 ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter.
  
    0.430
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.