STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Isop_2873Endonuclease/exonuclease/phosphatase; InterPro IPR005135; KEGG: cyt:cce_3495 phytase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Phytase. (426 aa)    
Predicted Functional Partners:
Isop_2021
Protein of unknown function DUF839; COGs: COG3211 phosphatase; InterPro IPR008557: IPR006311: IPR017909; KEGG: hau:Haur_4431 hypothetical protein; PFAM: protein of unknown function DUF839; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF839).
 
  
 0.640
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.585
Isop_1712
Phosphate ABC transporter membrane protein 2, PhoT family; COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515: IPR005672; KEGG: pfs:PFLU3316 phosphate transport system permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate transport system permease protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA.
  
  
 0.560
Isop_3217
COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; KEGG: rba:RB8889 alkaline phosphatase D; PRIAM: Alkaline phosphatase; SPTR: Alkaline phosphatase D (Precursor); PFAM: PhoD-like phosphatase.
  
  
 0.553
Isop_2535
Major intrinsic protein; COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family); InterPro IPR000425; KEGG: ote:Oter_1589 major intrinsic protein; PFAM: major intrinsic protein; SPTR: Major intrinsic protein; PFAM: Major intrinsic protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.531
Isop_0058
KEGG: zpr:ZPR_0251 putative secreted protein; SPTR: Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase.
 
   
 0.518
Isop_2872
Protein serine phosphatase with GAF(s) sensor(s); COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterProIPR000253: IPR003018: IPR001932: IPR019756: IPR 010822; KEGG: psl:Psta_4013 protein serine phosphatase with GAF(s) sensor(s); PFAM: Stage II sporulation protein E; Forkhead-associated protein; SMART: protein phosphatase 2C domain protein; Forkhead-associated protein; GAF domain protein; SPTR: Protein serine phosphatase with GAF(S) sensor(S); PFAM: GAF domain; Stage II sporulation protein E (SpoIIE); FHA domain.
  
    0.507
Isop_2760
Phosphate uptake regulator, PhoU; Plays a role in the regulation of phosphate uptake.
  
  
 0.501
Isop_2580
Peptidase S45 penicillin amidase; COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692: IPR014395; KEGG: ote:Oter_0831 penicillin amidase; PFAM: peptidase S45 penicillin amidase; SPTR: Penicillin amidase; PFAM: Penicillin amidase.
 
     0.483
Isop_2874
Hypothetical protein; KEGG: dan:Dana_GF19228 GF19228 gene product from transcript GF19228-RA; SPTR: GF19228.
       0.478
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.