STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_2897KEGG: mxa:MXAN_7038 hypothetical protein; SPTR: Putative uncharacterized protein. (202 aa)    
Predicted Functional Partners:
Isop_3407
InterPro IPR011447; KEGG: psl:Psta_2274 protein of unknown function DUF1552; PFAM: protein of unknown function DUF1552; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1552).
  
     0.728
Isop_3177
Protein of unknown function DUF1552; InterPro IPR006311: IPR017909: IPR011447; KEGG: plm:Plim_0286 protein of unknown function DUF1552; PFAM: protein of unknown function DUF1552; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1552).
  
     0.706
Isop_3178
Protein of unknown function DUF1588; InterProIPR009056: IPR013036: IPR013043: IPR013042: IPR 013039; KEGG: plm:Plim_0287 protein of unknown function DUF1592; PFAM: protein of unknown function DUF1588; protein of unknown function DUF1592; protein of unknown function DUF1587; protein of unknown function DUF1595; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1587); Protein of unknown function (DUF1592); Protein of unknown function (DUF1588); Protein of unknown function (DUF1595); Protein of unknown function (DUF1585).
  
     0.706
Isop_0343
Protein of unknown function DUF1592; InterPro IPR013036: IPR013043: IPR013042: IPR013039; KEGG: plm:Plim_0129 protein of unknown function DUF1592; PFAM: protein of unknown function DUF1592; protein of unknown function DUF1595; protein of unknown function DUF1587; protein of unknown function DUF1588; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1592); Protein of unknown function (DUF1587); Protein of unknown function (DUF1588); Protein of unknown function (DUF1595); Protein of unknown function (DUF1585).
  
     0.702
Isop_2115
COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR003814; KEGG: cyb:CYB_0846 hypothetical protein; PFAM: formylmethanofuran dehydrogenase subunit E region; SPTR: Conserved domain protein; PFAM: FmdE, Molybdenum formylmethanofuran dehydrogenase operon.
  
     0.701
Isop_0342
InterPro IPR011447: IPR017909; KEGG: psl:Psta_3460 protein of unknown function DUF1552; PFAM: protein of unknown function DUF1552; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1552).
  
     0.681
Isop_3408
Protein of unknown function DUF1592; InterPro IPR009056: IPR013042: IPR013039: IPR011658; KEGG: psl:Psta_2273 protein of unknown function DUF1588; PFAM: protein of unknown function DUF1592; protein of unknown function DUF1588; SMART: PA14 domain protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1588); Protein of unknown function (DUF1592); Protein of unknown function (DUF1595); PA14 domain.
  
     0.671
Isop_2366
InterPro IPR011031; KEGG: psl:Psta_4660 5'-nucleotidase/2' 3'-cyclic phosphodiesterase esterase-like protein; SPTR: 5'-nucleotidase/2' 3'-cyclic phosphodiesterase esterase-like protein.
  
     0.658
Isop_2651
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: plm:Plim_4208 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein.
  
     0.614
Isop_2012
Hypothetical protein; KEGG: rba:RB12718 putative tRNA adenylyltransferase; SPTR: Putative uncharacterized protein; PFAM: HD domain.
  
     0.602
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.