STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_2989Hypothetical protein; KEGG: hha:Hhal_1736 putative ABC transporter; SPTR: Putative ABC transporter. (705 aa)    
Predicted Functional Partners:
Isop_2990
InterPro IPR002917; KEGG: krh:KRH_10290 hypothetical protein; PFAM: GTP-binding protein HSR1-related; SPTR: Putative uncharacterized protein.
 
     0.772
Isop_2654
KEGG: nwa:Nwat_1803 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.744
Isop_0341
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mca:MCA2329 outer membrane efflux family protein, putative; PFAM: outer membrane efflux protein; SPTR: Putative outer membrane efflux family protein; PFAM: Outer membrane efflux protein.
  
     0.715
Isop_0077
Abortive infection protein; InterPro IPR003675; KEGG: noc:Noc_1193 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family.
  
     0.688
Isop_1012
InterPro IPR015259; KEGG: psl:Psta_2659 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Methylene-tetrahydromethanopterin dehydrogenase; PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+)); SPTR: Methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal.
  
     0.649
Isop_0340
InterPro IPR006143; KEGG: mca:MCA2325 RND family efflux transporter MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit.
  
     0.587
Isop_0363
Sulphate transporter; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: plm:Plim_3748 sulphate transporter; PFAM: sulphate transporter; SPTR: Sulphate transporter; PFAM: Sulfate transporter family.
  
     0.574
Isop_1058
GTP-binding protein HSR1-related protein; COGs: COG0486 GTPase; InterPro IPR002917; KEGG: alv:Alvin_1744 GTP-binding protein HSR1-related protein; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding protein HSR1-related protein; PFAM: GTPase of unknown function.
  
     0.540
Isop_3055
COGs: COG1907 sugar kinase; InterPro IPR004422; KEGG: xau:Xaut_3535 beta-ribofuranosylaminobenzene 5'-phosphate synthase; SPTR: Beta-ribofuranosylaminobenzene 5'-phosphate synthase family; TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinases C terminal; TIGRFAM: beta-RFAP synthase.
  
     0.512
Isop_1059
COGs: COG3597 Uncharacterized protein/domain associated with GTPase; KEGG: alv:Alvin_1745 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: GTPase of unknown function; Domain of unknown function (DUF697).
  
     0.494
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.