STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_3012ABC-type uncharacterized transport system; InterPro IPR019196; KEGG: cya:CYA_2880 hypothetical protein; PFAM: ABC-type uncharacterised transport system; SPTR: Putative uncharacterized protein; PFAM: ABC-type uncharacterized transport system. (626 aa)    
Predicted Functional Partners:
Isop_3011
KEGG: min:Minf_0410 ABC-type transport system involved in gliding motility, permease component; SPTR: ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
  
 0.894
Isop_3013
KEGG: cya:CYA_2879 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.875
Isop_0218
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: nhl:Nhal_0558 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
 
   
 0.586
Isop_1591
COGs: COG1538 Outer membrane protein; KEGG: plm:Plim_2805 outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
  
     0.531
Isop_1461
Hypothetical protein; KEGG: mca:MCA2974 PKD domain-containing protein; SPTR: PKD domain protein.
  
     0.510
Isop_3695
COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; InterPro IPR019196; KEGG: cts:Ctha_0317 putative permease of ABC transporter; PFAM: ABC-type uncharacterised transport system; SPTR: Putative permease of ABC transporter; PFAM: ABC-type uncharacterized transport system.
 
  
 0.491
Isop_3696
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: cts:Ctha_0318 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
   
 0.491
Isop_2736
KEGG: mxa:MXAN_5625 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.483
Isop_1520
InterPro IPR019734: IPR013026: IPR001440; KEGG: dak:DaAHT2_1784 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein.
  
     0.470
Isop_0957
KEGG: sus:Acid_6147 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362).
  
     0.451
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.