Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Isop_3119Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: sti:Sthe_0853 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: Methyltransferase domain. (234 aa)    
Predicted Functional Partners:
Isop_1069
KEGG: fra:Francci3_2916 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2029).
  
     0.621
Isop_0455
KEGG: cat:CA2559_07901 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.546
Isop_3118
KEGG: fgr:FG02020.1 hypothetical protein.
       0.485
Isop_3032
KEGG: npu:Npun_R2871 hypothetical protein; SPTR: Phosphoribosylaminoimidazole synthetase.
  
     0.459
Isop_3098
KEGG: swi:Swit_3100 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.459
Isop_3063
InterPro IPR011031; KEGG: rba:RB11084 response regulator aspartate phosphatase RapC; SPTR: Putative uncharacterized protein.
  
     0.416
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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