STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_3133NHL repeat containing protein; InterPro IPR006311: IPR017909: IPR001258; KEGG: psl:Psta_2952 NHL repeat containing protein; PFAM: NHL repeat containing protein; SPTR: Twin-arginine translocation pathway signal; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence. (382 aa)    
Predicted Functional Partners:
Isop_1705
InterPro IPR009056: IPR011444; KEGG: psl:Psta_4557 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
   0.791
Isop_0495
Protein of unknown function DUF1549; InterPro IPR011444: IPR009056; KEGG: rba:RB6511 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
   0.785
Isop_1217
Protein of unknown function DUF1549; InterPro IPR011444; KEGG: sus:Acid_0974 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
   0.784
Isop_0312
Protein of unknown function DUF1549; InterPro IPR011444; KEGG: rba:RB12155 signal peptide; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
   0.781
Isop_1944
Protein of unknown function DUF1549; InterPro IPR011444: IPR009056; KEGG: rba:RB13137 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
   0.779
Isop_1157
Protein of unknown function DUF1549; InterPro IPR011444; KEGG: rba:RB4803 signal peptide; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
   0.767
Isop_1296
InterPro IPR011444; KEGG: plm:Plim_0522 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
   0.761
Isop_2036
Protein of unknown function DUF1549; InterPro IPR011444; KEGG: rba:RB544 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553).
  
   0.761
Isop_1704
InterPro IPR017909: IPR010869; KEGG: psl:Psta_4556 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501).
  
     0.758
Isop_2381
InterPro IPR011444: IPR009056; KEGG: plm:Plim_0775 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553).
  
   0.755
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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