STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Isop_3203COGs: COG0429 hydrolase of the alpha/beta-hydrolase fold; InterPro IPR000952: IPR012020; KEGG: psl:Psta_4160 alpha/beta hydrolase fold protein; SPTR: Putative uncharacterized protein. (365 aa)    
Predicted Functional Partners:
Isop_3204
Hypothetical protein; KEGG: psl:Psta_2457 tetratricopeptide TPR_2 repeat protein; SPTR: Putative uncharacterized protein.
       0.773
Isop_3205
Hypothetical protein; KEGG: psl:Psta_2457 tetratricopeptide TPR_2 repeat protein; SPTR: Putative uncharacterized protein.
       0.516
Isop_3201
Endonuclease/exonuclease/phosphatase; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: scl:sce4697 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/Exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family.
       0.432
Isop_3202
Hypothetical protein; KEGG: ttu:TERTU_3103 putative type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Putative type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase.
       0.432
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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