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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Isop_3245Hypothetical protein; COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; KEGG: gvi:glr3105 hypothetical protein; SPTR: Glr3105 protein; PFAM: Domain of unknown function (DUF3526). (479 aa)    
Predicted Functional Partners:
Isop_3243
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR017871: IPR003593: IPR003439; KEGG: gvi:glr3104 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Glr3104 protein; PFAM: ABC transporter.
 
   0.889
Isop_3244
Hypothetical protein; COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; KEGG: gvi:glr3106 hypothetical protein; SPTR: Glr3106 protein; PFAM: Domain of unknown function (DUF3526).
 
    
0.649
Isop_1317
Na-Ca exchanger/integrin-beta4; InterPro IPR003644: IPR000169: IPR006626; KEGG: hau:Haur_4998 Na-Ca exchanger/integrin-beta4; PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; Parallel beta-helix repeat; SPTR: Na-Ca exchanger/integrin-beta4; PFAM: Calx-beta domain.
  
 
 0.543
Isop_3242
Cobalamin synthesis protein P47K; COGs: COG0523 Putative GTPase (G3E family); InterPro IPR003495: IPR011629; KEGG: rrs:RoseRS_3105 cobalamin synthesis protein, P47K; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; SPTR: Cobalamin synthesis protein, P47K; PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain.
 
     0.458
Isop_3246
Hypothetical protein; InterPro IPR019734; KEGG: afw:Anae109_3930 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein.
       0.453
Isop_2710
KEGG: plm:Plim_0186 protein-L-isoaspartate O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase.
  
     0.446
Isop_2231
COGs: COG0308 Aminopeptidase N; KEGG: rba:RB5627 aminopeptidase; SPTR: Putative aminopeptidase; PFAM: Peptidase family M1.
  
     0.417
Isop_2232
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR017871: IPR003439; KEGG: sus:Acid_6574 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
  
   0.413
Isop_3240
InterPro IPR000089; KEGG: mfa:Mfla_2222 secretion protein HlyD; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Secretion protein HlyD.
  
    0.403
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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