Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Isop_0783 | Isop_3158 | COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896; KEGG: ote:Oter_3934 Fe-S-cluster-containing hydrogenase components 1-like protein; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit. | Cyclic nucleotide-binding protein; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR017900: IPR018528: IPR018488: IPR002373: IPR 000595: IPR001041: IPR017896; KEGG: sus:Acid_4310 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; ferredoxin; SMART: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain. | 0.951 |
Isop_0783 | Isop_3368 | COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896; KEGG: ote:Oter_3934 Fe-S-cluster-containing hydrogenase components 1-like protein; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit. | COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: bts:Btus_1743 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease. | 0.550 |
Isop_3158 | Isop_0783 | Cyclic nucleotide-binding protein; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR017900: IPR018528: IPR018488: IPR002373: IPR 000595: IPR001041: IPR017896; KEGG: sus:Acid_4310 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; ferredoxin; SMART: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain. | COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896; KEGG: ote:Oter_3934 Fe-S-cluster-containing hydrogenase components 1-like protein; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit. | 0.951 |
Isop_3158 | Isop_3368 | Cyclic nucleotide-binding protein; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR017900: IPR018528: IPR018488: IPR002373: IPR 000595: IPR001041: IPR017896; KEGG: sus:Acid_4310 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; ferredoxin; SMART: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain. | COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: bts:Btus_1743 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease. | 0.550 |
Isop_3365 | Isop_3368 | KEGG: pth:PTH_0156 hypothetical protein; SPTR: Hypothetical membrane protein. | COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: bts:Btus_1743 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease. | 0.549 |
Isop_3367 | Isop_3368 | Hypothetical protein. | COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: bts:Btus_1743 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease. | 0.714 |
Isop_3367 | Isop_3370 | Hypothetical protein. | KEGG: rba:RB940 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.423 |
Isop_3368 | Isop_0783 | COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: bts:Btus_1743 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease. | COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896; KEGG: ote:Oter_3934 Fe-S-cluster-containing hydrogenase components 1-like protein; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit. | 0.550 |
Isop_3368 | Isop_3158 | COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: bts:Btus_1743 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease. | Cyclic nucleotide-binding protein; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR017900: IPR018528: IPR018488: IPR002373: IPR 000595: IPR001041: IPR017896; KEGG: sus:Acid_4310 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; ferredoxin; SMART: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain. | 0.550 |
Isop_3368 | Isop_3365 | COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: bts:Btus_1743 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease. | KEGG: pth:PTH_0156 hypothetical protein; SPTR: Hypothetical membrane protein. | 0.549 |
Isop_3368 | Isop_3367 | COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: bts:Btus_1743 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease. | Hypothetical protein. | 0.714 |
Isop_3368 | Isop_3370 | COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: bts:Btus_1743 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease. | KEGG: rba:RB940 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.452 |
Isop_3370 | Isop_3367 | KEGG: rba:RB940 hypothetical protein; SPTR: Putative uncharacterized protein. | Hypothetical protein. | 0.423 |
Isop_3370 | Isop_3368 | KEGG: rba:RB940 hypothetical protein; SPTR: Putative uncharacterized protein. | COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: bts:Btus_1743 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease. | 0.452 |