STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_3424InterPro IPR016130; KEGG: hypothetical protein; SPTR: Putative uncharacterized protein. (265 aa)    
Predicted Functional Partners:
Isop_3423
Hypothetical protein; InterPro IPR003006: IPR016130; KEGG: sno:Snov_2228 protein tyrosine/serine phosphatase; SPTR: Protein tyrosine/serine phosphatase; PFAM: Dual specificity phosphatase, catalytic domain.
      
0.780
Isop_0235
PDZ/DHR/GLGF domain protein; InterPro IPR001478; KEGG: ote:Oter_4030 PDZ/DHR/GLGF domain-containing protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: PDZ/DHR/GLGF domain protein; PFAM: PDZ domain (Also known as DHR or GLGF).
  
     0.586
Isop_3640
Proton-translocating NADH-quinone oxidoreductase, chain M; COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR010227: IPR001750: IPR003918; KEGG: psl:Psta_0731 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: Proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M.
    
 
 0.584
Isop_3422
Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
       0.550
Isop_0236
PDZ/DHR/GLGF domain protein; InterPro IPR001478: IPR001969; KEGG: rlt:Rleg2_1589 membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Membrane-associated zinc metalloprotease; PFAM: PDZ domain (Also known as DHR or GLGF).
  
     0.502
Isop_3032
KEGG: npu:Npun_R2871 hypothetical protein; SPTR: Phosphoribosylaminoimidazole synthetase.
  
     0.473
Isop_3541
InterPro IPR002035: IPR010768; KEGG: psl:Psta_2913 protein of unknown function DUF1355; PFAM: protein of unknown function DUF1355; von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; PFAM: von Willebrand factor type A domain; Protein of unknown function (DUF1355).
  
     0.456
Isop_2987
KEGG: psl:Psta_3111 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.453
Isop_3277
KEGG: nha:Nham_2630 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2029).
  
     0.452
Isop_3514
Hypothetical protein; KEGG: sus:Acid_1421 glycosyl transferase family protein; SPTR: Glycosyl transferase, family 39.
  
     0.448
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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