STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Isop_3451COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sti:Sthe_1714 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1. (454 aa)    
Predicted Functional Partners:
Isop_1903
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0890 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: A-glycosyltransferase, glycosyltransferase family 4 protein; PFAM: Glycosyl transferases group 1.
  
     0.747
Isop_2024
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1029 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase; PFAM: Glycosyl transferases group 1.
  
     0.738
Isop_2335
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: kra:Krad_1062 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
  
     0.728
Isop_1162
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: nde:NIDE2987 putative glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.707
Isop_1226
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cag:Cagg_2495 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
  
     0.699
Isop_0825
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sfu:Sfum_0373 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Probable glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.698
Isop_1080
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1030 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1.
  
     0.627
Isop_0448
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: afw:Anae109_1425 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1.
  
     0.625
Isop_1901
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: afw:Anae109_1425 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1.
  
     0.604
Isop_1685
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: psl:Psta_1640 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Putative glycosyl transferase; PFAM: Glycosyl transferases group 1.
  
     0.586
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.