Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Isop_3466COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: psl:Psta_3779 Mn2+ and Fe2+ transporter of the NRAMP family-like protein; SPTR: Mn2+ and Fe2+ transporter of the NRAMP family-like protein; PFAM: Natural resistance-associated macrophage protein. (434 aa)    
Predicted Functional Partners:
Isop_1060
ABC-3 protein; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001367: IPR001626; KEGG: psl:Psta_4677 ABC-3 protein; PFAM: ABC-3 protein; iron dependent repressor; SMART: iron dependent repressor; SPTR: ABC-3 protein; PFAM: ABC 3 transport family; Iron dependent repressor, metal binding and dimerisation domain.
  
  
 0.627
Isop_3467
Hypothetical protein; KEGG: rba:RB6221 signal peptide; SPTR: Putative uncharacterized protein.
       0.483
Isop_2873
Endonuclease/exonuclease/phosphatase; InterPro IPR005135; KEGG: cyt:cce_3495 phytase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Phytase.
  
     0.461
Isop_2021
Protein of unknown function DUF839; COGs: COG3211 phosphatase; InterPro IPR008557: IPR006311: IPR017909; KEGG: hau:Haur_4431 hypothetical protein; PFAM: protein of unknown function DUF839; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF839).
  
     0.403
Your Current Organism:
Isosphaera pallida
NCBI taxonomy Id: 575540
Other names: I. pallida ATCC 43644, Isosphaera pallida ATCC 43644, Isosphaera pallida DSM 9630, Isosphaera pallida IS1B, Isosphaera pallida str. ATCC 43644, Isosphaera pallida strain ATCC 43644
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